CellTransformer maps cell neighbors


"Doege suspects that some neighborhoods will match well between mice and people, while others will diverge. 

"Unfortunately, the quantity of data the algorithm needs to make accurate predictions isn’t available from human brains —at least, not yet. 

"While the mouse brain contains about 100 million cells, the human brain has around 170 billion, and that menagerie is still undergoing genetic analysis. 

"When sufficient amounts of that data become available, Abbasi-Asl and Tasic think CellTransformer will be up to the challenge.

"They are also interested in incorporating other technologies, such as the connection tracing used by Hintiryan, into CellTransformer. 

"This would be like adding streets and highways to the city neighborhoods. 

"And beyond the brain, the same algorithm could offer detailed cell maps of other organs, allowing scientists to compare, for example, healthy versus diabetic kidneys.

"Human scientists simply can’t sort out these details on their own. 'I see AI as kind of a helper for the human,' Kim said. 'Discovery will be accelerated in a dramatic way'."

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